.. Cromwell Manager documentation master file, created by sphinx-quickstart on Fri Oct 13 18:34:20 2017. You can adapt this file completely to your liking, but it should at least contain the root `toctree` directive. Welcome to Cromwell Manager's documentation! ============================================ .. toctree:: :maxdepth: 2 :caption: Contents: installation support Indices and tables ================== * :ref:`genindex` * :ref:`modindex` * :ref:`search` Modules ------- .. automodule:: cromwell_manager.cromwell .. autoclass:: cromwell_manager.cromwell.Cromwell :members: .. automodule:: cromwell_manager.workflow .. autoclass:: cromwell_manager.workflow.WorkflowBase :members: .. autoclass:: cromwell_manager.workflow.Workflow :members: .. autoclass:: cromwell_manager.workflow.SubWorkflow :members: .. automodule:: cromwell_manager.calledtask .. autoclass:: cromwell_manager.calledtask.CalledTask :members: .. autoclass:: cromwell_manager.calledtask.Shard :members: .. automodule:: cromwell_manager.resource_utilization .. autoclass:: cromwell_manager.resource_utilization.ResourceUtilization :members: .. automodule:: cromwell_manager.io_util .. autoclass:: cromwell_manager.io_util.GSObject :members: .. autoclass:: cromwell_manager.io_util.HTTPObject :members: .. autofunction:: cromwell_manager.io_util.open_gs_console .. autofunction:: cromwell_manager.io_util.package_workflow_dependencies